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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922802.1_cds_XP_016471567.1_63906
CDS Infomation

[gene=LOC107793691] [db_xref=GeneID:107793691] [protein=ferredoxin-dependent glutamate synthase 1, chloroplastic/mitochondrial-like] [protein_id=XP_016471567.1] [location=join(34130..34399,36427..36739,42703..43145,43232..43363,43741..43839,44337..44407,45935..46031,46281..46373,47059..47204,48986..49145,49489..49599,49738..49953,50373..50530,50680..50734,50880..51044,51546..51604,51739..51844,51943..51993,52114..52137)] [gbkey=CDS]
Sequence

ATGGCGGTGAACTCGGTAGCGAACGTCCCGCAGTTACTCTACGCGAATGGGCAGTCACCG
AAGATTGTTGCGGGGAGTAAAGACGGCGTGTTTGTTGATTTCTTCGGATTGTACTGTAAA
TCCAGCAAGCGTGTTCGTCGAAGGATTGGTTATGCGGCAGCTAATAGGAGAAGCTTGATA
AACAACAAGTGGAATGCAATTAACGCTGCTCTTGACCTTGAACGTGTTGCCACTAATGCA
TCTCAGCAATCCTCTGATATTGTGCCTAAGGTTGCTGACTTGGATGATATAATATCTGAA
AGAGGCGCATGTGGGGTTGGTTTTATCGCAAATTTGGACAATAAAGCATCACATGGAATC
GTCAAGGATGCTCTTGTAGCTCTTGGCTGCATGGAACATCGTGGAGGTTGTGGAGCTGAC
AATGATTCTGGTGATGGTTCTGGAGTGATGACTTCAATTCCTTGGGATCTTGTCAACGAT
TGGGCTGAGAAAGAAGGGATTGCAGTCTTTGACAAGCTTCATACTGGAGTTGGAATGATT
TTTCTTCCTAAGGATTGTAATCAGATGAATGAAGCCAAGAAAGTTATTTCCAATATCTTT
AACAATGAGGGTCTTGAGGTGCTTGGATGGAGGCCGGTTCCTGTAGATTCTTCTGTAGTT
GGATATTATGCAAAAGAAACTATGCCCAACATACAGCAGGTTTTTGTTCGAATTGTTAAA
GAGGAAAATGTTGATGACATCGAAAGAGAACTCTATATCTGTCGAAAACTCATTGAGAGA
GCTGTGAACTCAGAGATTTGGGGAAATGAACTTTATTTTTGTTCGTTGTCCAATCAAACT
ATAGTTTACAAGGGAATGCTTCGTTCTGAAGTCCTTGGGAGGTTTTATTATGACTTACAA
AGTGAGCTGTATACATCGCCTTTCGCTATTTACCATCGTAGATTCAGTACAAACACCAGT
CCCAGGTGGCCTCTTGCTCAACCAATGAGGTTTCTAGGTCATAACGGAGAGATCAACACT
ATTCAGGGAAACTTGAATTGGATGCAATCCAGAGAGGCCTCATTGAAATCAACTGTTTGG
CGTGACCGTGAGAATGAAATCCGTCCTTTTGGCAACCCGAAGGCGTCTGATTCTGCAAAT
TTAGATAGTGCGGCTGAATTACTCATAAGAAGTGGCCGAGCTCCTGAGGAAGCACTAATG
ATTCTTGTCCCAGAAGCTTATCAAAATCATCCAACATTGACTATTAAATATCCGGAGGTT
CTTGATTTTTATAATTACTACAAGGGTCAGATGGAAGCTTGGGATGGGCCAGCCTTACTC
TTGTTCAGCGATGGGAAGACAATTGGAGCTTGTCTCGATCGTAATGGACTTCGCCCTGCT
AGATATTGGCGGACCAAAGACAACGTTGTTTATGTTGCGTCTGAGGTTGGTGTGCTACCC
ATGGATGAATCAAAAGTTACAATGAAAGGACGTTTAGGTCCTGGTATGATGATAAGTGTT
GATCTTTCAAGTGGTCAGGTATTTGAGAATACAGAAGTCAAAAAGCGAGTTGCATTGTCA
AATCCATATGGGGAGTGGGTTAAAGAAAATTTGCGATCTTTGAAGCCTGTGAACTTTCTT
TCGACAACAGTAATGGACAGTGAAATAATACTAAAACGCCAACAGGCATATGGTTATTCT
AGCGAGGATGTTCAAATGGTTATTGAAAGTATGGCTGCACAAGGGAAGGAGCCTACATTT
TGTATGGGAGATGATATTCCCTTGGCTGTGTTATCTCAAAAGCCACATATGCTATATGAT
TATTTCAAGCAGCGGTTTGCTCAGGTTACAAATCCAGCTATTGATCCTCTAAGAGAAGGA
TTAGTCATGTCTCTTGAAGTCAATCTTGGCAAGCGTGGAAATATACTAGAGGTTGGACCT
GAAAATGCATCTCAGGTTATTTTGCCTAGTCCTGTACTTAATGAAGGAGAGCTTGAATCT
CTGTTGAAAGATTCACACTTGAAAGCTCATGTTTTGCCAACATTTTTTGATGTTGGGAAA
GGAGTTGAAGGGTCCTTGAAAAGGTCACTGTATAAACTATGTGAGGCAGCTGATGAAGCT
GTTAGAAATGGTGCTCAATTGCTTGTCCTCTCTGATAGATCTGATGAACTGGAAGCTACT
CGGCCTTCGATTCCAATACTTCTTGCTGTAGGTGCTGTTCACCAGCACCTGATTCAGAAT
GGCCTTAGAATGTCGGCTTCAATTGTTGCTGATACTGCCCAGTGCTTCAGTACTCATCAG
TTTGCTTGCTTGATCGGATATGGTGCAAGAACAGATTCTGAACTTAATCTTAGCCAAAAG
GCTGAGAAATGTATCGTTCAGTCTGCAAAGACATACTTATATATTCTTTCTTCATTCAGT
GCTGTGTGTCCATACTTGGCATTCGAAACATGTCGACAGTGGCGCTTGAGCACTAAAACT
GTGAAATTGATGCGGAATGGGAAAATGCCTACTGTTACCATTGAACAAGCTCAAAAGAAC
TTTTGCAAGGCAGTTAAATCTGGCCTTCTCAAAATTCTTTCAAAAATGGGAATCTCCTTG
CTCTCGAGTTATTGTGGTGCACAAATATTTGAAATCTATGGATTGGGAAAGGAGGTCGTA
GATGTTGCATTCTGTGGCAGTAAATCGAGCATCGGTGGATTGACCCTTGATGAGGTGAAC
GAAATGAGGAGTGCAGACTATGTAGATTTTCTCTTCCCTTGCTTGTGCACCCCTCACATC
CCACTGTAG

Peptide Sequence

PEP ID

XP_016471567.1
PEP Infomation

PREDICTED: ferredoxin-dependent glutamate synthase 1, chloroplastic/mitochondrial-like [Nicotiana tabacum]
Sequence

MAVNSVANVPQLLYANGQSPKIVAGSKDGVFVDFFGLYCKSSKRVRRRIGYAAANRRSLI
NNKWNAINAALDLERVATNASQQSSDIVPKVADLDDIISERGACGVGFIANLDNKASHGI
VKDALVALGCMEHRGGCGADNDSGDGSGVMTSIPWDLVNDWAEKEGIAVFDKLHTGVGMI
FLPKDCNQMNEAKKVISNIFNNEGLEVLGWRPVPVDSSVVGYYAKETMPNIQQVFVRIVK
EENVDDIERELYICRKLIERAVNSEIWGNELYFCSLSNQTIVYKGMLRSEVLGRFYYDLQ
SELYTSPFAIYHRRFSTNTSPRWPLAQPMRFLGHNGEINTIQGNLNWMQSREASLKSTVW
RDRENEIRPFGNPKASDSANLDSAAELLIRSGRAPEEALMILVPEAYQNHPTLTIKYPEV
LDFYNYYKGQMEAWDGPALLLFSDGKTIGACLDRNGLRPARYWRTKDNVVYVASEVGVLP
MDESKVTMKGRLGPGMMISVDLSSGQVFENTEVKKRVALSNPYGEWVKENLRSLKPVNFL
STTVMDSEIILKRQQAYGYSSEDVQMVIESMAAQGKEPTFCMGDDIPLAVLSQKPHMLYD
YFKQRFAQVTNPAIDPLREGLVMSLEVNLGKRGNILEVGPENASQVILPSPVLNEGELES
LLKDSHLKAHVLPTFFDVGKGVEGSLKRSLYKLCEAADEAVRNGAQLLVLSDRSDELEAT
RPSIPILLAVGAVHQHLIQNGLRMSASIVADTAQCFSTHQFACLIGYGARTDSELNLSQK
AEKCIVQSAKTYLYILSSFSAVCPYLAFETCRQWRLSTKTVKLMRNGKMPTVTIEQAQKN
FCKAVKSGLLKILSKMGISLLSSYCGAQIFEIYGLGKEVVDVAFCGSKSSIGGLTLDEVN
EMRSADYVDFLFPCLCTPHIPL

Transcript Sequence

Gene sequence data has not been registered.